After successfully returning to Earth on the renovated Stratos 4, the four main characters are visited by the Comet Blasters Chizuru Kubo and Annette Kerry, who bring them a shocking video. Meanwhile, Orbital Station 7 is in serious trouble... This two-episode OVA comes between the first and second seasons. (Source: ANN, edited by Glenn Magus Harvey)

The Earth has developed a defense system against large meteorites that are on a collision course with it. This protection system is made up of the Comet Blasters based in several space stations as the 1st line of defense, using nuclear warheads launched by spaceships. The 2nd line of defense consists of the Meteor Sweepers launching from ground airbases using hypersonic planes with special missiles to deal with the resulting debris from the blasts. Mikaze is a troubled girl that is a trainee pilot for a Meteor Sweeper team that dreams of becoming a prestigious Comet Blaster pilot. Stratos 4 revolves around Mikaze's and her teammates' challenges to become real pilots, while the Earth faces the threats that come from space. (Source: ANN, edited by Falre)

Having failed the Comet Blaster exams mysteriously, Mikaze and her friends are sent back to the Shimoji Island base, where, with three new Meteor Sweeper trainees around, they have been promoted to instructor positions. Meanwhile, more comets are on their way to Earth, and the mysteries behind the rift in the Cosmic Emergency Management Agency—as well as the alien parasites—begins to unravel.

After fending off the threat of a Neuroi invasion of Romagna and destroying the enemy's nest over Venezia, Yoshika Miyafuji goes back to her home town in the Empire of Fusou. Despite the loss of her magical and healing abilities, the former officer of the 501st Joint Fighter Wing wants to continue studying medicine. This is in order to help those in need, both civilians and those on the front lines alike. She receives an invitation from a prestigious school in Europe and decides to accept the offer, embarking on a journey back to the war-torn continent. However, a new danger arises, as more and more Neuroi manage to break through human defense lines, appearing unnoticed in supposedly safe areas and disturbing the balance of power in Europe. Yoshika's sense of duty collides with her inability to pilot a Striker Unit, but with her friends in peril, it seems that there is only one thing she can do.