One day, when Remu Mikage is on a video call with his sister, Shiki, who has traveled to the futuristic Okinotori-island Mega Float City for school, she confesses that both the audio and visuals of her are completely artificial. In order to be more efficient in her studies, Shiki has used neural-linked nanomachines to upload her consciousness onto a computer and is storing her physical body in a body pool. While shocked, Remu is supportive of his sister's decision, until the disaster known as the Early Rapture happens. The Early Rapture causes everyone who has uploaded their consciousnesses to either fall into a coma or perish. Remu visits his sister's empty apartment one last time, but is shocked when Shiki arrives at the door. With no memory of her family or past, and being pursued by a violent group of researchers, Shiki and her brother are forced to flee using her newfound power of nanomachine manipulation.

On the islands of Cremona, a vigilante runs amok. Celebrated by some and hunted by others, the notorious Killer B takes justice into his own hands, armed with a sharp blade and superhuman abilities. Unable to apprehend this renegade, the Royal Investigation Service (RIS) calls upon the expertise of Keith Flick, a seasoned, yet eccentric detective who was relegated to the Archives Department following a personal loss. As crimes in Cremona begin to escalate, from stealthy executions of wrongdoers to sophisticated strikes on public figures, it soon becomes clear that there is more than one person responsible. With the help of his impulsive sidekick Lily Hoshina, and unexpected aid from the elusive Killer B himself, Keith begins to unravel plots involving secret organizations, domestic terrorism, and human experiments. When the involvement of the RIS extends beyond the scope of justice, the extent of the government's corruption—as well as the trustworthiness of close allies—are thrown into question.

In the first season of B: The Beginning, two men confronted their own past with great sacrifice. Maverick detective Keith Flick fought against his demons and finally exposed the dark secrets behind the Kingdom of Cremona. Mutant wunderkind Koku finally reunited with the most precious memory from his stolen childhood. Several months have passed since then, and the entire world seems to have forgotten the turmoil caused by those events. As Keith returns to the Royal Police to conduct his own investigation, Koku and Yuna try to enjoy an ordinary life in peace. But the consequences of the Jaula Blanca experiments are far from being extinct, as Koku soon discovers when his supposedly dead lab mate Kirisame suddenly shows up. (Source: Official Site)

The dark-haired bishounen is Sakon Tachibana, a puppeteer, and the other is Ukon, his favorite puppet, and best friend. Sakon is the (only) grandson of Saemon Tachibana, a national treasure of Japan famous for his manipulation of Bunraku puppets. Ukon is a child doll puppet made in the early Meiji era by the famous female dollmaker Unosuke. Together they run into murders and solve them. (Source: AnimeNfo)