Kanenone Gakuen is an all-male boarding school located in the countryside of Japan. Although an all-male school is nothing new, life can become quite difficult when there are no female students for miles around. In order to help the psychological health of everyone involved, the school board has decided to try and merge with the nearest all-girl boarding school in order to become co-ed. The boys of Kanenone are more than thrilled at the prospect, and the girls are curious as to how interesting school life might become if there were more boys around. Before any serious decisions are made, the girls have been invited to stay at Kanenone for one month as a test. Green Green follows Yuusuke Takazaki and his naughty room mates called the Baka (Idiot) Trio, and their ability to talk to the girls without making complete fools of themselves. But as soon as the school bus with the girls arrives, things become weird, hormonal, and hysterical. In particular, a girl named Midori Chitose leaps off the bus and immediately embraces a very confused Yuusuke. Is he a natural ladies' man, or do the two of them have a shared history that he is not aware of?

An injured man is found in the woods by a girl named Eruruu, and everything about him is mysterious. Without knowledge of his past nor even his own name, he is welcomed to Eruruu's home and is given the name Hakuoro by her grandmother, and younger sister, Aruruu. While the inhabitants of the village have large ears and tails, Hakuoro's defining physical trait is quite different as he has neither ears nor tail, but only a mask that he cannot remove. Soon after he becomes a part of the villagers' lives, a revolution against the tyrannical emperor of the land begins, and the conflict finds its way to his new home. Hakuoro must do whatever he can to save the people and the village that he has come to love, all while uncovering the mysteries that shroud his past.

Waking up to find herself in a parallel version of Fuyuki City, Illyasviel Illya von Einzbern is lost and alone. She discovers her home in ruins, with a massive crater lying in the center of her hometown. With snow falling in the middle of summer, confusion consumes the young elementary schooler, who has no knowledge of where her friends or her wand Ruby may be. Making it to the remains of her house, she is suddenly tackled by an amnesiac girl. Wearing a gym uniform as the icy temperature sets in, the mysterious girl has no idea of where she is or why she showed up. However, this stranger, known as Tanaka, apparently has information about the location of Rin Toosaka, Miyu Edelfelt, and the rest of Illya's missing friends. Fleeing from agents of the Ainsworth family⁠—those in control of this parallel realm—where will these two end up, and how will Illya restore the present back to the world she once knew?

When university student Zhang Chulan returns to his home village, he is devastated to learn that his grandfather Zhang Xilin's grave has been desecrated. As he investigates the cemetery in search for clues, he is attacked by a tomb raider using the false identity of Zhang Xilin's granddaughter. Left to die in a swarm of zombies summoned by the person who spirited his grandfather's body away, Zhang Chulan manages to escape thanks to qi, the power that his grandfather taught him. When Zhang Chulan returns to his uneventful student life, he is shocked to again meet the tomb raider, Feng Baobao, who condemned him to a grim fate. Affiliated with a state organization tasked with handling outcasts known as qi wielders, Baobao forces him to join a delivery company that acts as a front for their true pursuits. As various factions clash to seize the mysterious power Zhang Chulan is said to have inherited from his grandfather, the young man must learn how to choose his allies if he wants to survive in this dangerous world of outcasts.